PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462946041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family B3
Protein Properties Length: 1922aa    MW: 221452 Da    PI: 8.316
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462946041genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.53.3e-2028116198
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                ffk +    +++++ +++p kf+++++gk   +k++ l+ +sg++W+v +  +k  ++ +l++GW++Fvka++Lke+D +vF+ +g+s+f   v +f+
  462946041  28 FFKFM--TGNFAKA-ISIPEKFVNNFNGK--ITKEVNLKAPSGETWQVGV--NKDADELFLKSGWEDFVKAHELKENDLLVFTCSGNSSF--EVLIFE 116
                55666..5566666.9*******888877..6779***************..********************************999999..777776 PP

2B341.22.9e-13293391199
                EEEE-..-HHHHT.T-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
         B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                ff++l +s+vl++ + l++p +f+++h + ++    ++tl    + ++W vk+ + ++ +++    + ++Fv +n+L+egD++ F+l++  ++ +++v+v
  462946041 293 FFTILQKSHVLRNkSFLIFPSRFVADHlD-SN-L-HEITLCRpNRKEKWCVKYYHARTAQGIR-NYNYSRFVCENKLREGDICAFELMKGvRRVTMTVHV 388
                8999*******99556799********53.32.3.378888836669******7788887754.559********************9888********9 PP

                E-S CS
         B3  97 frk 99 
                +r+
  462946041 389 IRN 391
                986 PP

3B348.61.5e-153984751698
                EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                l++p kf ++++gk   sk+  l+ ++g++W + +  +k +++  +l++GW++Fvk ++Lke+D ++F+ +g+s+    v +f+
  462946041 398 LSIPVKFGKNFKGK--ISKEFNLKAPNGETWHIGV--DKDDDElLFLKSGWEDFVKVHELKENDLLIFTCSGNSSL--EVLIFE 475
                89******888888..889****************..****9999************************9887777..777776 PP

4B336.86.8e-12585683199
                EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
         B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                ff+vl  s+v ++ + l++p +fa++h  + + + +++l    +  +W vk+  ++++++  +   +  +Fv++n+L+egD++ F+l++  ++ +++v++
  462946041 585 FFTVLQMSHVRRRnNFLIFPSRFAADHLDN-RLH-EIILCRpNRKDKWCVKY--KRGRDTqGIRNYNFFKFVRENKLREGDICAFELMKGaKRVTMNVHA 680
                7788888888877466799********544.454.55555527779******..555444234456899*****************998779999**999 PP

                E-S CS
         B3  97 frk 99 
                +rk
  462946041 681 IRK 683
                987 PP

5B348.81.3e-15120312791698
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                   +p kf+++++g  ++   + l+ +s+++W + +  +k+++++++t+GW+ Fvka++L+e+D ++F+ +++s+f   v++f+
  462946041 1203 AGIPEKFVKNFKGWITK--GVDLKAPSSETWHIGV--DKNDNEMFFTSGWEYFVKAHELQENDLLLFTSSNNSSF--EVMIFE 1279
                 569*****888766444..59**************..*******************************7777888..777776 PP

6B332.31.8e-10139914821599
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
         B3   15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99  
                  +++p +fa++h  + +++ t+  +  + ++W vk+ y+ +  r++      +Fv++n+L+egD++vF+l++  ++  ++v+v+rk
  462946041 1399 AFTVPSDFAADHL-EARSDDTVLCRPNRKEKWLVKYYYTPYN-RCLQNLQFFKFVRENKLREGDICVFELMKGaRRVMMTVHVIRK 1482
                 4899*****9993.345667899999999*******775553.5555555889****************99777999999999987 PP

7B352.96.6e-17160516861199
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                 ++++ +++p kf ++ +gk   +k+  l+ +s+++W+v l  +k+ g+ ++ +GW +F+ka++L+++Df++F+l+g++ f   v++f++
  462946041 1605 FAQS-ISIPDKFGNSLKGKV--NKEFNLKAPSSETWRVSL--TKHAGELFFMSGWGDFAKAHELQDNDFLIFTLSGNDAF--DVMIFDA 1686
                 4443.8*******9997774..568***************..**********************************9999..9999986 PP

8B339.31.2e-1218211913699
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
         B3    6 tpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99  
                 ++++  k+++l++p +fa++h   +++s +++l    +  +W v++ + +  +++  +  W +F ++ngL+   +++F+l++  +++++vv+v+rk
  462946041 1821 KTHMGYKNNLLIIPSDFAADHL--ETRSHDIQLLRpNRKDKWCVNYYHGRATRGFSCR-RWIKFMQDNGLCKDFICMFELMKGaKRRTMVVHVVRK 1913
                 4567778999*********995..3477799999945559******555555556555.9*******************99887*********997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.94E-2221120IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086315.18525118IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.8E-2327120IPR015300DNA-binding pseudobarrel domain
CDDcd100172.16E-1827115No hitNo description
PfamPF023621.5E-1728117IPR003340B3 DNA binding domain
SMARTSM010196.4E-1528118IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.0E-16285390IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.44E-15286390IPR015300DNA-binding pseudobarrel domain
CDDcd100178.22E-13291390No hitNo description
PfamPF023628.5E-12293391IPR003340B3 DNA binding domain
SMARTSM010191.4E-7293383IPR003340B3 DNA binding domain
PROSITE profilePS508637.711294378IPR003340B3 DNA binding domain
PROSITE profilePS5086313.719383477IPR003340B3 DNA binding domain
SMARTSM010195.1E-9385477IPR003340B3 DNA binding domain
SuperFamilySSF1019363.34E-17397479IPR015300DNA-binding pseudobarrel domain
PfamPF023621.7E-12398476IPR003340B3 DNA binding domain
CDDcd100175.38E-14398474No hitNo description
Gene3DG3DSA:2.40.330.108.4E-18398479IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.8E-16576682IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-15580683IPR015300DNA-binding pseudobarrel domain
CDDcd100172.61E-12583682No hitNo description
PfamPF023622.4E-10585683IPR003340B3 DNA binding domain
SMARTSM010198.9E-9585684IPR003340B3 DNA binding domain
PROSITE profilePS5086310.532586682IPR003340B3 DNA binding domain
SuperFamilySSF514451.21E-1317461190IPR017853Glycoside hydrolase superfamily
PfamPF002322.7E-1097491193IPR001360Glycoside hydrolase family 1
Gene3DG3DSA:3.20.20.802.5E-1597501191IPR013781Glycoside hydrolase, catalytic domain
PRINTSPR001314.3E-1410291043IPR001360Glycoside hydrolase family 1
PRINTSPR001314.3E-1411031111IPR001360Glycoside hydrolase family 1
PRINTSPR001314.3E-1411161127IPR001360Glycoside hydrolase family 1
PRINTSPR001314.3E-1411371154IPR001360Glycoside hydrolase family 1
PRINTSPR001314.3E-1411611173IPR001360Glycoside hydrolase family 1
PROSITE profilePS5086312.85811881281IPR003340B3 DNA binding domain
SMARTSM010193.7E-511911281IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.7E-1712011283IPR015300DNA-binding pseudobarrel domain
PfamPF023624.6E-1312021279IPR003340B3 DNA binding domain
SuperFamilySSF1019366.87E-1712031283IPR015300DNA-binding pseudobarrel domain
CDDcd100173.23E-1312051278No hitNo description
SMARTSM010190.06413841483IPR003340B3 DNA binding domain
PROSITE profilePS508639.4613851483IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-1213991483IPR015300DNA-binding pseudobarrel domain
PfamPF023621.7E-814001482IPR003340B3 DNA binding domain
CDDcd100173.33E-914001481No hitNo description
SuperFamilySSF1019361.06E-1014001483IPR015300DNA-binding pseudobarrel domain
CDDcd100171.23E-514871557No hitNo description
Gene3DG3DSA:2.40.330.105.4E-814921561IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-714931561IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.55615061562IPR003340B3 DNA binding domain
SuperFamilySSF1019361.39E-2015901689IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.67615941687IPR003340B3 DNA binding domain
CDDcd100178.67E-1515961685No hitNo description
SMARTSM010197.5E-1515971687IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-1915971689IPR015300DNA-binding pseudobarrel domain
PfamPF023625.7E-1416061686IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.9E-1418071912IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.24E-1318081912IPR015300DNA-binding pseudobarrel domain
CDDcd100171.41E-918131912No hitNo description
SMARTSM010194.1E-918151914IPR003340B3 DNA binding domain
PROSITE profilePS508639.89718161914IPR003340B3 DNA binding domain
PfamPF023621.5E-1018171913IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0003677Molecular FunctionDNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
Sequence ? help Back to Top
Protein Sequence    Length: 1922 aa     Download sequence    Send to blast
MVERGCESCR KWQEHYYWEH MDVSKIRFFK FMTGNFAKAI SIPEKFVNNF NGKITKEVNL  60
KAPSGETWQV GVNKDADELF LKSGWEDFVK AHELKENDLL VFTCSGNSSF EVLIFEANGC  120
EKVSSLSANK TGPNLLKNSA NKANWGKHDE QYSLSDSKNT SKPSQLVGSP QVATTSQNSS  180
GKKSSDISGV CLLQDIGAAS SQINLKICIN RNVFLLFLFN IYTDSCIMFT EMLPESPNST  240
NDQVEREEIC EEDSDEEYSN HKYYYSRIAD RLSDEEKEEV ITLASIRSDN PAFFTILQKS  300
HVLRNKSFLI FPSRFVADHL DSNLHEITLC RPNRKEKWCV KYYHARTAQG IRNYNYSRFV  360
CENKLREGDI CAFELMKGVR RVTMTVHVIR NVDDRLVLSI PVKFGKNFKG KISKEFNLKA  420
PNGETWHIGV DKDDDELLFL KSGWEDFVKV HELKENDLLI FTCSGNSSLE VLIFEASGCE  480
KVSFQLANKT GPSMLKNSVD KPNWRHHDEH CRYYYSVSAG WISSRRHYFT ELNYHVKREA  540
IGEEDSDEGY SNRNYYYSRI ADRLSDEEKE EVLTLSSIRS DNPVFFTVLQ MSHVRRRNNF  600
LIFPSRFAAD HLDNRLHEII LCRPNRKDKW CVKYKRGRDT QGIRNYNFFK FVRENKLREG  660
DICAFELMKG AKRVTMNVHA IRKVDDSTRV LLQRTAGAQA SGTHLLTQVN LLFEFVQLKK  720
AELGIITHPW LSYSCILILL GHDFISYMMA GKMPDKSNGD VAADGYHKFK DDVKLIAETG  780
LEAYRFSISW SRLIPNGRGA VNPKGLQYYN NLIDELVRRG VQIHVMLYQL DLPQVLEDEY  840
GGWLSPRIYF SEANFSNILI NVGTATRRED FTAYADVCFR EFGDRVLYWT TLDEVNIAAT  900
ASYDTGQFPP GRCSDPFGIT KCAAGNSSVE PYIAAHYMLL AHASATRLYR GKYQGKQKGS  960
VGINIFTFWT YSFTNTTADL QATKRCQDFL FGWILEPLVF GDYPMVMKKR VGSRLPSFTK  1020
VQSEAVRGAL DFIGVNHYYS LYVSDRPLKK GIRDFSADMS THYRGSKTDP PLGPSAPTSI  1080
PIDPRGLPLL AEYLNEVYGD FPIYIQETGN NGSLNDTDRM DYMKQHIGST LTALRNGANV  1140
KGYFAWSFLD VFELVAGFKS QYGLYRVDFD DKALPRQARA SARWYSNFLK NKGIRMENEV  1200
NEAGIPEKFV KNFKGWITKG VDLKAPSSET WHIGVDKNDN EMFFTSGWEY FVKAHELQEN  1260
DLLLFTSSNN SSFEVMIFEP SGCEKVSSLF DSYHTYKHLN DTRRHCEHNS LSDSDDSSMP  1320
SRLIGSQHNA STSKKSSAKE SESLNNSSYD TKHEATEEEE SDDIYYDSRY YYSRSANRLA  1380
YEEKKTILSL APVEADNPAF TVPSDFAADH LEARSDDTVL CRPNRKEKWL VKYYYTPYNR  1440
CLQNLQFFKF VRENKLREGD ICVFELMKGA RRVMMTVHVI RKKAHGRFVL NARSHDTVLC  1500
RPNRKEKWLV KYYYTPYNWC LQNLQFFKFV RENKLREGDI CIFELMKGAR RVMITVHVIR  1560
KKDDGRFVLM VQQGCESCQK WQDHYHQEHM DVSRIRFFKL LTGDFAQSIS IPDKFGNSLK  1620
GKVNKEFNLK APSSETWRVS LTKHAGELFF MSGWGDFAKA HELQDNDFLI FTLSGNDAFD  1680
VMIFDASGCE KVSSFFKGKR DPCMHKHFQN IVGQQAEHCN LSDSDDTSTP LPLIEFAYKA  1740
SASKKMRGKT KPREDPESPD SSNHRIKREG MGDEEQSDDR HADSMYYSRS ARILTGKERE  1800
EILSLASIQP GNPVFMTVLQ KTHMGYKNNL LIIPSDFAAD HLETRSHDIQ LLRPNRKDKW  1860
CVNYYHGRAT RGFSCRRWIK FMQDNGLCKD FICMFELMKG AKRRTMVVHV VRKVNRRFIM  1920
AR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ptq_B1e-118743118964503Beta-glucosidase Os4BGlu12
3ptq_A1e-118743118964503Beta-glucosidase Os4BGlu12
3ptm_B1e-118743118964503Beta-glucosidase Os4BGlu12
3ptm_A1e-118743118964503Beta-glucosidase Os4BGlu12
3ptk_B1e-118743118964503Beta-glucosidase Os4BGlu12
3ptk_A1e-118743118964503Beta-glucosidase Os4BGlu12
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-28B3 family protein